ctcRbase

Entry Detail

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General Information

Database ID: SKCM08456 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: FAN1 Full Name: FANCD2 and FANCI associated nuclease 1 Category: mRNA Synonyms: KIAA1018|KMIN|MTMR15|hFAN1 Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 30903852 End Site(bp): 30943108 Gene Summary: This gene plays a role in DNA interstrand cross-link repair and encodes a protein with 5' flap endonuclease and 5'-3' exonuclease activity. Mutations in this gene cause karyomegalic interstitial nephritis. Alternatively spliced transcript variants encoding distinct isoforms have been described. [provided by RefSeq, Feb 2016] External Links: Ensembl ID: ENSG00000198690 HGNC ID: HGNC:29170 Entrez Gene: 22909

Expression Profile of FAN1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-506-3p YES YES NO Display: