ctcRbase

Entry Detail

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General Information

Database ID: SKCM08457 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TSHZ1 Full Name: teashirt zinc finger homeobox 1 Category: mRNA Synonyms: CAA|NY-CO-33|SDCCAG33|TSH1 Chromosome: chr18 Strand: + Coordinate: Start Site(bp): 75210755 End Site(bp): 75289950 Gene Summary: This gene encodes a colon cancer antigen that was defined by serological analysis of recombinant cDNA expression libraries. The encoded protein is a member of the teashirt C2H2-type zinc-finger protein family and may be involved in transcriptional regulation of developmental processes. Mutations in this gene may be associated with congenital aural atresia syndrome. [provided by RefSeq, Jan 2012] External Links: Ensembl ID: ENSG00000179981 HGNC ID: HGNC:10669 Entrez Gene: 10194

Expression Profile of TSHZ1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-124-3p YES YES YES hsa-miR-129-5p YES YES YES hsa-miR-1297 YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-142-3p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-190a-5p YES YES YES hsa-miR-190b YES YES YES hsa-miR-194-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-217 YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-24-3p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-448 YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-599 YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-873-5p YES YES YES hsa-miR-876-5p YES YES NO Display: