ctcRbase

Entry Detail

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General Information

Database ID: SKCM08477 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SCAF4 Full Name: SR-related CTD associated factor 4 Category: mRNA Synonyms: SFRS15|SRA4 Chromosome: chr21 Strand: - Coordinate: Start Site(bp): 31671033 End Site(bp): 31732075 Gene Summary: This gene likely encodes a member of the arginine/serine-rich splicing factor family. A similar protein in Rat appears to bind the large subunit of RNA polymerase II and provide a link between transcription and pre-mRNA splicing. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009] External Links: Ensembl ID: ENSG00000156304 HGNC ID: HGNC:19304 Entrez Gene: 57466

Expression Profile of SCAF4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-30a-5p NO YES YES hsa-miR-30b-5p NO YES YES hsa-miR-30c-5p NO YES YES hsa-miR-30d-5p NO YES YES hsa-miR-30e-5p NO YES YES hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO Display: