ctcRbase

Entry Detail

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General Information

Database ID: SKCM08512 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SEC22A Full Name: SEC22 homolog A, vesicle trafficking protein Category: mRNA Synonyms: SEC22L2 Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 123201927 End Site(bp): 123274130 Gene Summary: The protein encoded by this gene belongs to the member of the SEC22 family of vesicle trafficking proteins. This protein has similarity to rat SEC22 and may act in the early stages of the secretory pathway. [provided by RefSeq, Nov 2008] External Links: Ensembl ID: ENSG00000121542 HGNC ID: HGNC:20260 Entrez Gene: 26984

Expression Profile of SEC22A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-185-5p YES YES YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-204-5p NO YES YES hsa-miR-211-5p NO YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-30a-5p NO YES YES hsa-miR-30b-5p NO YES YES hsa-miR-30c-5p NO YES YES hsa-miR-30d-5p NO YES YES hsa-miR-30e-5p NO YES YES hsa-miR-381-3p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-494-3p YES YES NO Display: