ctcRbase

Entry Detail

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General Information

Database ID: SKCM08519 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: BCAT2 Full Name: branched chain amino acid transaminase 2 Category: mRNA Synonyms: BCAM|BCATM|BCT2|PP18 Chromosome: chr19 Strand: - Coordinate: Start Site(bp): 48795062 End Site(bp): 48811029 Gene Summary: This gene encodes a branched chain aminotransferase found in mitochondria. The encoded protein forms a dimer that catalyzes the first step in the production of the branched chain amino acids leucine, isoleucine, and valine. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009] External Links: Ensembl ID: ENSG00000105552 HGNC ID: HGNC:977 Entrez Gene: 587

Expression Profile of BCAT2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-122-5p YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-25-3p YES YES YES hsa-miR-32-5p YES YES YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES hsa-miR-9-5p YES YES YES hsa-miR-96-5p YES YES YES Display: