ctcRbase

Entry Detail

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General Information

Database ID: SKCM08538 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PPP1R13B Full Name: protein phosphatase 1 regulatory subunit 13B Category: mRNA Synonyms: ASPP1|p53BP2-like|p85 Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 103733752 End Site(bp): 103847590 Gene Summary: This gene encodes a member of the ASPP (apoptosis-stimulating protein of p53) family of p53 interacting proteins. The protein contains four ankyrin repeats and an SH3 domain involved in protein-protein interactions. ASPP proteins are required for the induction of apoptosis by p53-family proteins. They promote DNA binding and transactivation of p53-family proteins on the promoters of proapoptotic genes. Expression of this gene is regulated by the E2F transcription factor. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000088808 HGNC ID: HGNC:14950 Entrez Gene: 23368

Expression Profile of PPP1R13B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-195-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-31-5p YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-9-5p YES NO YES Display: