ctcRbase

Entry Detail

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General Information

Database ID: SKCM09011 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: AGO2 Full Name: argonaute RISC catalytic component 2 Category: mRNA Synonyms: CASC7|EIF2C2|LINC00980|PPD|Q10 Chromosome: chr8 Strand: - Coordinate: Start Site(bp): 140520156 End Site(bp): 140635619 Gene Summary: This gene encodes a member of the Argonaute family of proteins which play a role in RNA interference. The encoded protein is highly basic, and contains a PAZ domain and a PIWI domain. It may interact with dicer1 and play a role in short-interfering-RNA-mediated gene silencing. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009] External Links: Ensembl ID: ENSG00000123908 HGNC ID: HGNC:3263 Entrez Gene: 27161

Expression Profile of AGO2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-100-5p YES YES YES hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-128-3p YES YES YES hsa-miR-132-3p YES YES YES hsa-miR-140-3p YES NO YES hsa-miR-151a-3p YES NO YES hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-183-5p YES YES YES hsa-miR-184 YES YES YES hsa-miR-195-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-21-5p YES YES YES hsa-miR-217 YES NO YES hsa-miR-219a-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-346 YES YES YES hsa-miR-376a-3p YES YES YES hsa-miR-376b-3p YES YES YES hsa-miR-384 YES YES YES hsa-miR-424-5p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-503-5p YES YES NO hsa-miR-590-5p YES YES YES hsa-miR-9-5p YES YES NO hsa-miR-99a-5p YES YES YES hsa-miR-99b-5p YES YES YES Display: