ctcRbase

Entry Detail

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General Information

Database ID: SKCM09058 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: MAPKAP1 Full Name: mitogen-activated protein kinase associated protein 1 Category: mRNA Synonyms: JC310|MIP1|SIN1|SIN1b|SIN1g Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 125437393 End Site(bp): 125707234 Gene Summary: This gene encodes a protein that is highly similar to the yeast SIN1 protein, a stress-activated protein kinase. Alternatively spliced transcript variants encoding distinct isoforms have been described. Alternate polyadenylation sites as well as alternate 3' UTRs have been identified for transcripts of this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000119487 HGNC ID: HGNC:18752 Entrez Gene: 79109

Expression Profile of MAPKAP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-489-3p YES NO YES hsa-miR-491-5p YES YES YES hsa-miR-542-3p YES YES YES hsa-miR-7-5p YES YES YES Display: