ctcRbase

Entry Detail

---



General Information

Database ID: SKCM09106 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TIGD2 Full Name: tigger transposable element derived 2 Category: mRNA Synonyms: HEL106 Chromosome: chr4 Strand: + Coordinate: Start Site(bp): 89111500 End Site(bp): 89114899 Gene Summary: The protein encoded by this gene belongs to the tigger subfamily of the pogo superfamily of DNA-mediated transposons in humans. These proteins are related to DNA transposons found in fungi and nematodes, and more distantly to the Tc1 and mariner transposases. They are also very similar to the major mammalian centromere protein B. The exact function of this gene is not known. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000180346 HGNC ID: HGNC:18333 Entrez Gene: 166815

Expression Profile of TIGD2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-365a-3p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-9-5p YES YES NO Display: