ctcRbase

Entry Detail

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General Information

Database ID: SKCM09112 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ALKBH1 Full Name: alkB homolog 1, histone H2A dioxygenase Category: mRNA Synonyms: ABH|ABH1|ALKBH|alkB|hABH Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 77672404 End Site(bp): 77708020 Gene Summary: This gene encodes a homolog to the E. coli alkB gene product. The E. coli alkB protein is part of the adaptive response mechanism of DNA alkylation damage repair. It is involved in damage reversal by oxidative demethylation of 1-methyladenine and 3-methylcytosine. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000100601 HGNC ID: HGNC:17911 Entrez Gene: 8846

Expression Profile of ALKBH1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-106b-5p YES YES NO hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-31-5p YES YES YES hsa-miR-339-5p YES YES YES hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-370-3p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-758-3p YES YES NO hsa-miR-875-5p YES YES NO hsa-miR-98-5p YES NO YES Display: