ctcRbase

Entry Detail

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General Information

Database ID: SKCM09116 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: WDR44 Full Name: WD repeat domain 44 Category: mRNA Synonyms: RAB11BP|RPH11|SYM-4 Chromosome: chrX Strand: + Coordinate: Start Site(bp): 118346073 End Site(bp): 118449961 Gene Summary: This gene encodes a protein that interacts with the small GTPase rab11. A similar protein in rat binds the GTP-containing active form of rab11. This protein may play a role in endosome recycling. Alternate splicing results in multiple transcript variants.[provided by RefSeq, May 2010] External Links: Ensembl ID: ENSG00000131725 HGNC ID: HGNC:30512 Entrez Gene: 54521

Expression Profile of WDR44 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-132-3p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-299-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-376c-3p YES YES YES hsa-miR-383-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-421 YES YES NO hsa-miR-483-3p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-548o-3p YES NO NO hsa-miR-590-5p YES YES NO Display: