ctcRbase

Entry Detail

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General Information

Database ID: SKCM09228 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: POP1 Full Name: POP1 homolog, ribonuclease P/MRP subunit Category: mRNA Synonyms: ANXD2 Chromosome: chr8 Strand: + Coordinate: Start Site(bp): 98117297 End Site(bp): 98159834 Gene Summary: This gene encodes the protein subunit of two different small nucleolar ribonucleoprotein complexes: the endoribonuclease for mitochondrial RNA processing complex and the ribonuclease P complex. The encoded protein is a ribonuclease that localizes to the nucleus and functions in pre-RNA processing. This protein is also an autoantigen in patients suffering from connective tissue diseases. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2009] External Links: Ensembl ID: ENSG00000104356 HGNC ID: HGNC:30129 Entrez Gene: 10940

Expression Profile of POP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-182-5p YES YES NO hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-30a-5p NO YES YES hsa-miR-30b-5p NO YES YES hsa-miR-30c-5p NO YES YES hsa-miR-30d-5p NO YES YES hsa-miR-30e-5p NO YES YES hsa-miR-369-3p YES NO YES hsa-miR-376a-3p NO YES YES hsa-miR-376b-3p NO YES YES hsa-miR-655-3p YES NO YES Display: