ctcRbase

Entry Detail

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General Information

Database ID: SKCM09238 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NFIL3 Full Name: nuclear factor, interleukin 3 regulated Category: mRNA Synonyms: E4BP4|IL3BP1|NF-IL3A|NFIL3A Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 91409045 End Site(bp): 91423862 Gene Summary: The protein encoded by this gene is a transcriptional regulator that binds as a homodimer to activating transcription factor (ATF) sites in many cellular and viral promoters. The encoded protein represses PER1 and PER2 expression and therefore plays a role in the regulation of circadian rhythm. Three transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Feb 2014] External Links: Ensembl ID: ENSG00000165030 HGNC ID: HGNC:7787 Entrez Gene: 4783

Expression Profile of NFIL3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-199a-5p YES YES YES hsa-miR-199b-5p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-489-3p YES NO YES hsa-miR-495-3p YES YES NO Display: