ctcRbase

Entry Detail

---



General Information

Database ID: SKCM09269 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PDGFD Full Name: platelet derived growth factor D Category: mRNA Synonyms: IEGF|MSTP036|SCDGF-B|SCDGFB Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 103907186 End Site(bp): 104164379 Gene Summary: The protein encoded by this gene is a member of the platelet-derived growth factor family. The four members of this family are mitogenic factors for cells of mesenchymal origin and are characterized by a core motif of eight cysteines, seven of which are found in this factor. This gene product only forms homodimers and, therefore, does not dimerize with the other three family members. It differs from alpha and beta members of this family in having an unusual N-terminal domain, the CUB domain. Two splice variants have been identified for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000170962 HGNC ID: HGNC:30620 Entrez Gene: 80310

Expression Profile of PDGFD Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-25-3p YES NO NO hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-32-5p YES NO NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-363-3p YES NO NO hsa-miR-367-3p YES NO NO hsa-miR-376c-3p YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-92a-3p YES NO NO hsa-miR-92b-3p YES NO NO hsa-miR-93-5p YES YES NO Display: