ctcRbase

Entry Detail

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General Information

Database ID: SKCM09310 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CALB2 Full Name: calbindin 2 Category: mRNA Synonyms: CAB29|CAL2|CR Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 71358713 End Site(bp): 71390438 Gene Summary: This gene encodes an intracellular calcium-binding protein belonging to the troponin C superfamily. Members of this protein family have six EF-hand domains which bind calcium. This protein plays a role in diverse cellular functions, including message targeting and intracellular calcium buffering. It also functions as a modulator of neuronal excitability, and is a diagnostic marker for some human diseases, including Hirschsprung disease and some cancers. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2010] External Links: Ensembl ID: ENSG00000172137 HGNC ID: HGNC:1435 Entrez Gene: 794

Expression Profile of CALB2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-205-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-376c-3p YES YES NO hsa-miR-379-5p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-9-5p YES YES YES Display: