ctcRbase

Entry Detail

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General Information

Database ID: SKCM09346 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PJA1 Full Name: praja ring finger ubiquitin ligase 1 Category: mRNA Synonyms: PRAJA1|RNF70 Chromosome: chrX Strand: - Coordinate: Start Site(bp): 69160851 End Site(bp): 69165793 Gene Summary: This gene encodes an enzyme that has E2-dependent E3 ubiquitin-protein ligase activity. This enzyme belongs to a class of ubiquitin ligases that include a RING finger motif, and it can interact with the E2 ubiquitin-conjugating enzyme UbcH5B. This gene is located in an area of chromosome X where several X-linked cognitive disability disorders have been associated, and it has also been found as part of a contiguous gene deletion associated with craniofrontonasal syndrome, though a direct link to any disorder has yet to be demonstrated. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2010] External Links: Ensembl ID: ENSG00000181191 HGNC ID: HGNC:16648 Entrez Gene: 64219

Expression Profile of PJA1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES NO hsa-miR-154-5p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-551a YES YES NO hsa-miR-551b-3p YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-876-5p YES YES NO Display: