Entry Detail


General Information

Database ID:exR0085400
RNA Name:hsa-miR-1244
RNA Type:miRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):231713368End Site(bp):231713393
External Links:hsa-miR-1244



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RHOA
chr3
49359145
49412998
-
CPNE3
chr8
86514435
86561498
+
KIAA1191
chr5
176346062
176361807
-
ZMYM4
chr1
35268709
35422058
+
CCT2
chr12
69585426
69601570
+
AL590764.2
chrX
71103987
71111575
-
RPS5
chr19
58386400
58394806
+
UBA2
chr19
34428352
34471251
+
CDC42EP3
chr2
37641882
37738468
-
EEF1G
chr11
62559596
62574086
-
GAK
chr4
849276
932373
-
SPIN1
chr9
88388430
88478694
+
ERLIN1
chr10
100150094
100186033
-
MT-CO3
chrMT
9207
9990
+
HNRNPU
chr1
244840638
244864560
-
TOLLIP
chr11
1274371
1309654
-
MLF2
chr12
6747996
6767475
-
CCDC18
chr1
93179919
93278730
+
MBD3
chr19
1573596
1592865
-
RPS2
chr16
1962058
1964841
-
PTMA
chr2
231706895
231713541
+
UBC
chr12
124911604
124917368
-
OAS2
chr12
112978395
113011723
+
APELA
chr4
164877178
164898965
+
SLC7A1
chr13
29509414
29595688
-
ARHGDIB
chr12
14942031
14961728
-
ARMT1
chr6
151452258
151470101
+
AP002990.1
chr11
62559603
62591531
-
B2M
chr15
44711487
44718877
+
RFWD3
chr16
74621399
74666877
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA