Entry Detail


General Information

Database ID:exR0085470
RNA Name:hsa-miR-1294
RNA Type:miRNA
Chromosome:chr5
Starnd:+
Coordinate:
Start Site(bp):154347153End Site(bp):154347174
External Links:hsa-miR-1294



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE126399
Description:Ascites-derived circulating microRNAs as potential diagnostic biomarkers of gastric cancer-associated malignant ascites
Experimental Design:Disease vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Liver Cirrhosis
Number of Case:12
Number of Control:10
Number of Samples:22





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CYB5R3
chr22
42617840
42649392
-
STK40
chr1
36339624
36385896
-
EIF4A1
chr17
7572706
7579006
+
TRAPPC10
chr21
44012309
44106552
+
ABCA1
chr9
104781006
104928155
-
POGK
chr1
166839447
166856344
+
FGFR1
chr8
38400215
38468834
-
KMT2A
chr11
118436490
118526832
+
RAB8A
chr19
16111889
16134234
+
TEX261
chr2
70985942
70994873
-
ANKRD49
chr11
94493979
94499578
+
PGRMC1
chrX
119236245
119244466
+
PTMS
chr12
6765516
6770952
+
CRY2
chr11
45847118
45883248
+
PTP4A1
chr6
63521746
63583436
+
APLP2
chr11
130068147
130144811
+
CDKN1B
chr12
12715058
12722369
+
UBE2G2
chr21
44768580
44801826
-
PDPR
chr16
70113626
70162537
+
AKT2
chr19
40230317
40285536
-
RNF157
chr17
76142465
76240493
-
ZHX3
chr20
41178448
41317672
-
ARHGAP28
chr18
6729718
6915716
+
PRRC2B
chr9
131373636
131500197
+
FYCO1
chr3
45917899
45995824
-
ZNF512B
chr20
63956704
63969930
-
SMAD7
chr18
48919853
48952052
-
PDE4DIP
chr1
148808181
149048286
+
TAGLN2
chr1
159918107
159925732
-
NACC1
chr19
13116862
13141147
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000247
chr10
74474868
74475660
+
hsa_circ_0000798
chr17
65941524
65944422
+
hsa_circ_0000246
chr10
74468040
74475660
+
hsa_circ_0001085
chr2
191765289
191789319
+
hsa_circ_0000744
chr17
15968183
15971435
-
hsa_circ_0000799
chr17
65941524
65972074
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007161.3
chr7
7640752
8004053
+
AC021078.1
chr5
149494314
149504670
-
AC022150.4
chr19
52650437
52653284
-
AL022311.1
chr22
37876148
37895563
+
H19
chr11
1995176
2001470
-
LINC00265
chr7
39733430
39793092
+
NEAT1
chr11
65422774
65445540
+
TUG1
chr22
30969245
30979395
+
Display:



Experiment Detail

GEO ID:GSE126399
Sample Source:Ascite
Source Fraction:Exosome
Platform:GPL18402
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1972
Sample treatment protocol:Exosome from biofluid was precipitated using miRCURY Exosome Isolation Kit (Exiqon).
RNA Extract protocol:Exosomal RNA was isolated using Trizol LS Reagent (Molecular Research Center, Cincinnati, OH, USA).
RNA library preparation protocol:Cyanine 3-labeled cRNA (complementary RNA) was generated from Agilent's Low RNA Input Linear Amplification kit with 500ng total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA