exRNAdisease

General Information

Database ID:

exR0206501

RNA Name:

DANCR

RNA Type:

lncRNA

Chromosome:

chr4

Starnd:

Coordinate:

Start Site(bp):

52712404

End Site(bp):

52720351

External Links:

Disease Information

Disease Name:	Subarachnoid Hemorrhage
Disease Category:	Nervous System Diseases
MeSH ID:	D013345
Type:	Diseases Category/Nervous System Diseases
Alias:	SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial

Expression Detail

GEO ID:	GSE121868
Description:	Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:	Disease Sample Source
Case Disease Type:	Subarachnoid Hemorrhage
Case Disease SubType:	NA
Case Sample:	Subarachnoid Hemorrhage
Control Sample:	Blood Plasma
Number of Case:	257
Number of Control:	266
Number of Samples:	523

Regulatory Relationship

mRNA targets:

Gene Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
ABCF1	chr6	30571393	30597179	+
ABHD14A-ACY1	chr3	51974706	51989183	+
AC009690.1	chr15	72284727	72375981	-
ACOT7	chr1	6264269	6394391	-
ACTB	chr7	5527148	5563784	-
ACTG1	chr17	81509971	81523847	-
ACVR1B	chr12	51951699	51997078	+
ACY1	chr3	51983340	51989197	+
AKT2	chr19	40230317	40285536	-
AL358113.1	chr9	69035747	69255187	+
ALDOA	chr16	30064164	30070457	+
AC139530.2	chr17	81703371	81720539	+
AKIP1	chr11	8911139	8920084	+

miRNA targets:

miRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
hsa-miR-33a-5p	chr22	41900949	41900969	+
hsa-miR-216a-5p	chr2	55989020	55989041	-
hsa-miR-125b-5p	chr21	16590253	16590274	+
hsa-miR-135a-5p	chr12	97563834	97563856	+
hsa-miR-125a-5p	chr19	51693268	51693291	+
hsa-miR-135b-5p	chr1	205448361	205448383	-
hsa-miR-496	chr14	101060628	101060649	+
hsa-miR-33b-5p	chr17	17813897	17813916	-
hsa-miR-656-3p	chr14	101066766	101066786	+
hsa-miR-758-3p	chr14	101026071	101026092	+
hsa-miR-214-5p	chr1	172138857	172138878	-
hsa-miR-874-3p	chr5	137647582	137647603	-
hsa-miR-1301-3p	chr2	25328651	25328674	-
hsa-miR-3180-3p	chr16	16309936	16309957	+
hsa-miR-3196	chr20	63238788	63238805	+
hsa-miR-3200-3p	chr22	30731610	30731631	+
hsa-miR-4319	chr18	44970140	44970156	-
hsa-miR-3180	chr16	15154949	15154967	-
hsa-miR-4436a	chr2	88812425	88812445	+
hsa-miR-1343-3p	chr11	34941888	34941909	+
hsa-miR-5047	chr17	64501230	64501250	-
hsa-miR-5000-3p	chr2	75090873	75090894	+
hsa-miR-506-5p	chrX	147230788	147230809	-
hsa-miR-1277-5p	chrX	118386401	118386424	+
hsa-miR-1306-5p	chr22	20086072	20086093	+
hsa-miR-6783-3p	chr17	44934618	44934639	-
hsa-miR-6816-5p	chr22	20114726	20114746	-

circRNA targets:

lncRNA targets:

Display:

Experiment Detail

GEO ID:	GSE121868
Sample Source:	Blood
Source Fraction:	Plasma
Platform:	GPL11154
Method:	NGS
Num of detected RNA Type:	5
Num of detected RNAs of this Type:	820
Sample treatment protocol:	NA
RNA Extract protocol:	total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:	TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.

Reference