Entry Detail



General Information

Database ID:exR0207196
RNA Name:hsa-miR-18a-5p
RNA Type:miRNA
Chromosome:chr13
Starnd:+
Coordinate:
Start Site(bp):91350756End Site(bp):91350778
External Links:hsa-miR-18a-5p



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
PATZ1
chr22
31325804
31346346
-
TUBA4A
chr2
219249710
219278170
-
SURF4
chr9
133361450
133376166
-
DDX5
chr17
64498254
64508199
-
SND1
chr7
127652194
128092609
+
HIF1AN
chr10
100529072
100559998
+
SIK2
chr11
111602449
111730855
+
FKBP1A
chr20
1368978
1393172
-
USP10
chr16
84699978
84779922
+
PARL
chr3
183829271
183884933
-
ASF1B
chr19
14119512
14136613
-
PRPF38B
chr1
108692310
108702928
+
ADAT2
chr6
143422832
143450695
-
ZNF12
chr7
6688433
6706947
-
DNAJC9
chr10
73183362
73247255
-
AC131160.1
chr3
183815568
183884889
-
ACSS2
chr20
34872146
34927962
+
MRPS18A
chr6
43671303
43687791
-
XRCC6
chr22
41621119
41664048
+
ROMO1
chr20
35699272
35700984
+
PEX5
chr12
7188685
7218574
+
NDUFV2
chr18
9102630
9134345
+
UBE2Z
chr17
48908407
48929056
+
NOP58
chr2
202265736
202303661
+
RNF4
chr4
2462220
2625320
+
CHD1
chr5
98853985
98928957
-
ATP2B1
chr12
89588049
89709300
-
SLC41A1
chr1
205789094
205813748
-
NCDN
chr1
35557473
35567274
+
HMGCS1
chr5
43287470
43313512
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000712
chr16
68208276
68225678
+
hsa_circ_0001186
chr21
35475133
35475818
+
hsa_circ_0001247
chr22
46125304
46136418
+
hsa_circ_0000921
chr19
30476129
30477324
+
hsa_circ_0000943
chr19
47421744
47440665
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC073896.4
chr12
56162359
56190284
-
AC093010.3
chr3
114314501
114329714
-
AC145207.5
chr17
81878425
81881106
-
AL162171.3
chr14
88589231
88592408
+
AP005263.1
chr18
9102736
9254346
+
CASC2
chr10
118046279
118210158
+
GAS5
chr1
173858559
173868882
-
NEAT1
chr11
65422774
65445540
+
SNHG1
chr11
62851984
62855953
-
SNHG15
chr7
44983023
44986961
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:2021
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA