exRNAdisease

Entry Detail

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General Information

Database ID: exR0207501 RNA Name: hsa-miR-339-5p RNA Type: miRNA Chromosome: chr7 Starnd: - Coordinate: Start Site(bp): 1022990 End Site(bp): 1023012 External Links: hsa-miR-339-5p

Disease Information

Disease Name: Subarachnoid Hemorrhage Disease Category: Nervous System Diseases MeSH ID: D013345 Type: Diseases Category/Nervous System Diseases Alias: SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial

Expression Detail

GEO ID: GSE121868 Description: Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients Experimental Design: Disease Sample Source Case Disease Type: Subarachnoid Hemorrhage Case Disease SubType: NA Case Sample: Subarachnoid Hemorrhage Control Sample: Blood Plasma Number of Case: 257 Number of Control: 266 Number of Samples: 523

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABL2 chr1 179099330 179229684 - ARHGDIA chr17 81867721 81871378 - ATXN7 chr3 63864557 64003462 + EDEM1 chr3 5187646 5219958 + FEM1A chr19 4791734 4801273 + FOXP1 chr3 70952817 71583993 - G3BP2 chr4 75642782 75724525 - MMD chr17 55392622 55421924 - NCOA6 chr20 34689097 34825651 - NUSAP1 chr15 41320794 41381050 + PRDM15 chr21 41798225 41879482 - PTPA chr9 129110950 129148946 + SLC44A1 chr9 105244622 105439171 + STAT3 chr17 42313324 42388568 - VCP chr9 35056064 35072627 - WDR4 chr21 42843094 42879568 - ZNF689 chr16 30602558 30624012 - miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0000120 chr1 117944807 118009049 + lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004069.1 chr4 105137280 105140619 - AC145207.5 chr17 81878425 81881106 - GAS5 chr1 173858559 173868882 - H19 chr11 1995176 2001470 - KCNQ1OT1 chr11 2608328 2699994 - LINC01578 chr15 92819540 92899701 + NEAT1 chr11 65422774 65445540 + Display:

Experiment Detail

GEO ID: GSE121868 Sample Source: Blood Source Fraction: Plasma Platform: GPL11154 Method: NGS Num of detected RNA Type: 5 Num of detected RNAs of this Type: 2021 Sample treatment protocol: NA RNA Extract protocol: total RNA RNA was isolated using MiRVana Paris (Ambion). RNA library preparation protocol: TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA