Entry Detail



General Information

Database ID:exR0208039
RNA Name:hsa-miR-5100
RNA Type:miRNA
Chromosome:chr10
Starnd:+
Coordinate:
Start Site(bp):42997630End Site(bp):42997651
External Links:hsa-miR-5100



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SNU13
chr22
41673933
41690504
-
GHITM
chr10
84139509
84153568
+
AGRN
chr1
1020120
1056118
+
PRRC2B
chr9
131373636
131500197
+
HNRNPH1
chr5
179614178
179634784
-
GTF3C4
chr9
132670035
132694953
+
PPCDC
chr15
75023586
75117462
+
SLC35B1
chr17
49700934
49709014
-
SRP72
chr4
56467617
56503681
+
SRPK1
chr6
35832966
35921342
-
CHPF
chr2
219538948
219543809
-
NOP14
chr4
2937933
2963406
-
SLC52A2
chr8
144354135
144361272
+
THOP1
chr19
2785503
2815807
+
MACF1
chr1
39081316
39487177
+
CPTP
chr1
1324756
1328896
+
UBR4
chr1
19074510
19210266
-
ZNF136
chr19
12163064
12189871
+
HCN1
chr5
45254948
45696498
-
NUP93
chr16
56730118
56850286
+
KCTD2
chr17
75032575
75065889
+
NIN
chr14
50719763
50831121
-
KDSR
chr18
63327726
63367228
-
ATP1A1
chr1
116372668
116410261
+
PRMT6
chr1
107056674
107067636
+
FLNA
chrX
154348524
154374638
-
NUP107
chr12
68686951
68745809
+
P4HTM
chr3
48989889
49007153
+
VSIG10
chr12
118063593
118136026
-
WASF2
chr1
27404230
27490167
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
POLR2J4
chr7
43940895
44019175
-
SNHG3
chr1
28505980
28510892
+
AC008738.2
chr19
33305036
33309387
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:2021
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA