Entry Detail



General Information

Database ID:exR0208809
RNA Name:ABCD4
RNA Type:mRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):74285269End Site(bp):74303055
External Links:ENSG00000119688



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
QSER1
chr11
32892820
32993316
+
MRPL46
chr15
88459477
88467390
-
MXRA8
chr1
1352689
1361777
-
NSUN2
chr5
6599239
6633291
-
M6PR
chr12
8940361
8949761
-
SIK1
chr21
43414483
43427131
-
RPL10
chrX
154389955
154409168
+
SFI1
chr22
31488688
31618588
+
C5orf24
chr5
134845680
134859735
+
RDH13
chr19
55039108
55071291
-
CRYL1
chr13
20403666
20525873
-
LONRF3
chrX
118974614
119018355
+
ORC3
chr6
87590067
87667453
+
ACOT8
chr20
45841721
45857405
-
TP53RK
chr20
46684365
46689444
-
ZNF668
chr16
31060843
31074240
-
PFN1
chr17
4945652
4949061
-
LTK
chr15
41503637
41513887
-
TOMM40L
chr1
161225939
161230746
+
FBXW4
chr10
101610664
101695295
-
NEO1
chr15
73051710
73305205
+
SELENOS
chr15
101270817
101277500
-
NHP2
chr5
178149460
178153967
-
EIF4H
chr7
74174245
74197101
+
HSP90AB1
chr6
44246166
44253888
+
BTBD2
chr19
1985438
2034881
-
TRIP13
chr5
892884
919357
+
HSPA4
chr5
133052013
133106449
+
CCDC167
chr6
37482938
37499893
-
VMP1
chr17
59707192
59842255
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005519.1
chr14
74289127
74294425
-
AC005562.1
chr17
30576464
30672789
+
AC007952.4
chr17
19112000
19112636
-
AC011476.2
chr19
55027593
55053928
-
MALAT1
chr11
65497688
65506516
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA