Entry Detail



General Information

Database ID:exR0208841
RNA Name:ABI2
RNA Type:mRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):203328239End Site(bp):203447728
External Links:ENSG00000138443



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
C15orf39
chr15
75195643
75212169
+
KLC1
chr14
103561896
103714249
+
PGAM1
chr10
97426191
97433444
+
ESPL1
chr12
53268299
53293638
+
COX5B
chr2
97646062
97648383
+
MYH9
chr22
36281277
36388067
-
YWHAQ
chr2
9583967
9630997
-
HLA-DQA1
chr6
32628179
32647062
+
MAN1B1
chr9
137086985
137109183
+
PUDP
chrX
6667865
7148190
-
PEX19
chr1
160276812
160286348
-
PKM
chr15
72199029
72231822
-
TRAF7
chr16
2155698
2178129
+
DICER1
chr14
95086228
95158010
-
LAMTOR4
chr7
100148907
100155944
+
ATN1
chr12
6924463
6942321
+
LMNB1
chr5
126776623
126837020
+
AL139300.1
chr14
103562962
103685924
+
SLC15A4
chr12
128793194
128823958
-
CCT2
chr12
69585426
69601570
+
NPLOC4
chr17
81556887
81648465
-
MT-CO3
chrMT
9207
9990
+
SLC9A3R1
chr17
74748628
74769353
+
API5
chr11
43311963
43344529
+
HSDL2
chr9
112380080
112472405
+
BOLA2-SMG1P6
chr16
29443230
29454651
-
TXNDC5
chr6
7881517
7910788
-
C9orf40
chr9
74946583
74952912
-
RPL22L1
chr3
170864875
170870208
-
HYOU1
chr11
119044188
119057227
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-218-5p
chr5
168768211
168768231
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC079354.2
chr2
202178660
202179391
-
ARHGAP27P1-BPTFP1-KPNA2P3
chr17
64749663
64781707
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA