Entry Detail



General Information

Database ID:exR0208849
RNA Name:ABR
RNA Type:mRNA
Chromosome:chr17
Starnd:-
Coordinate:
Start Site(bp):1003518End Site(bp):1229738
External Links:ENSG00000159842



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
LSM4
chr19
18306230
18323274
-
SHC3
chr9
89005771
89178818
-
PMS1
chr2
189784085
189877629
+
ZMYM2
chr13
19958670
20091829
+
RPL26
chr17
8377516
8383213
-
TROAP
chr12
49323236
49331731
+
RAB24
chr5
177301198
177303744
-
RPAIN
chr17
5419641
5432876
+
TTYH3
chr7
2631986
2664802
+
AC010422.3
chr19
12643831
12648397
-
CKM
chr19
45306413
45322875
-
ANTXR1
chr2
69013178
69249327
+
PPDPF
chr20
63520765
63522206
+
NKD2
chr5
1008802
1038943
+
CEP250
chr20
35455164
35519280
+
CCZ1
chr7
5898725
5926550
+
PAFAH1B1
chr17
2593210
2685615
+
FHOD1
chr16
67229387
67247481
-
YBX1
chr1
42682418
42703805
+
ZNRF3
chr22
28883572
29057488
+
RBM4
chr11
66638617
66668374
+
RPL4
chr15
66498015
66524532
-
BCR
chr22
23179704
23318037
+
CFLAR
chr2
201116154
201176687
+
FSCN1
chr7
5592816
5606655
+
CDK13
chr7
39950121
40099580
+
ACTB
chr7
5527148
5563784
-
RPL39
chrX
119786504
119791630
-
TPT1
chr13
45333471
45341370
-
MSH2
chr2
47403067
47663146
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-877-5p
chr6
30584332
30584351
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC074183.1
chr7
84939349
84940245
-
AC135178.2
chr17
8318088
8318712
-
MALAT1
chr11
65497688
65506516
+
RMRP
chr9
35657751
35658018
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA