Entry Detail



General Information

Database ID:exR0208851
RNA Name:ABRACL
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):139028745End Site(bp):139043302
External Links:ENSG00000146386



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
FGFBP3
chr10
91906584
91909486
-
RPL11
chr1
23691742
23696835
+
STIL
chr1
47250139
47314147
-
BIRC6
chr2
32357028
32618899
+
EIF4A1
chr17
7572706
7579006
+
REPIN1
chr7
150368189
150374044
+
UBE2I
chr16
1308880
1327018
+
UTP18
chr17
51260546
51297936
+
EZR
chr6
158765741
158819368
-
RPS5
chr19
58386400
58394806
+
NUCKS1
chr1
205712822
205750182
-
APLP2
chr11
130068147
130144811
+
POMT1
chr9
131502902
131523806
+
DCLRE1B
chr1
113905213
113914086
+
MIF
chr22
23894383
23895227
+
CALR
chr19
12938578
12944489
+
XPO7
chr8
21919662
22006585
+
GOT1
chr10
99396870
99430624
-
TUBB
chr6
30720352
30725426
+
MEX3A
chr1
156072013
156082465
-
PXMP2
chr12
132687587
132704985
+
BABAM1
chr19
17267376
17281249
+
HSPB8
chr12
119178642
119221131
+
PER1
chr17
8140472
8156506
-
DHX32
chr10
125836337
125896436
-
APP
chr21
25880550
26171128
-
SLC38A2
chr12
46358188
46372773
-
NEDD9
chr6
11183298
11382348
-
S100A16
chr1
153606886
153613145
-
SENP3-EIF4A1
chr17
7563287
7578715
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-205-5p
chr1
209432166
209432187
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AL035458.2
chr20
34234840
34281173
-
AC135586.2
chr12
132688049
132714912
+
AL359924.1
chr1
237862175
237928321
+
AP006621.3
chr11
777578
784297
+
MAPKAPK5-AS1
chr12
111839764
111842902
-
NEAT1
chr11
65422774
65445540
+
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA