Entry Detail



General Information

Database ID:exR0209102
RNA Name:AGAP1
RNA Type:mRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):235494043End Site(bp):236131800
External Links:ENSG00000157985



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
KAT2A
chr17
42113111
42121367
-
LIN54
chr4
82909973
83012926
-
ENAH
chr1
225486835
225653142
-
OXSR1
chr3
38165089
38255484
+
NCOR2
chr12
124324415
124567589
-
LMAN2
chr5
177331567
177351668
-
NFATC2IP
chr16
28950807
28967097
+
C14orf132
chr14
96039324
96093889
+
HES6
chr2
238238267
238240662
-
SELENOW
chr19
47778585
47784686
+
HDAC3
chr5
141620876
141636849
-
CUL3
chr2
224470150
224585397
-
RPUSD1
chr16
784974
788397
-
SNX10
chr7
26291895
26374329
+
CNOT1
chr16
58519951
58629885
-
MEIS1
chr2
66433452
66573869
+
GIGYF2
chr2
232697299
232860575
+
TEX264
chr3
51662693
51704323
+
KIF1A
chr2
240713761
240821036
-
RPS27A
chr2
55231903
55235853
+
GNAS
chr20
58839718
58911192
+
TRAIP
chr3
49828601
49856574
-
GDAP2
chr1
117863485
117929621
-
DYNC1LI1
chr3
32525974
32570858
-
SLX1A
chr16
30193887
30197561
+
LRBA
chr4
150264435
151015727
-
GAPDH
chr12
6534512
6538374
+
PSMD7
chr16
74296814
74306288
+
SIPA1L2
chr1
232397965
232561558
-
HMGA2
chr12
65824131
65966295
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC022400.3
chr10
73674295
73730466
-
AGAP1-IT1
chr2
235505751
235507566
+
AGAP11
chr10
86970741
87010126
+
AL136982.1
chr10
86992406
87010203
+
NOP14-AS1
chr4
2934882
2961738
+
SLX1A-SULT1A3
chr16
30193892
30204310
+
TMEM147-AS1
chr19
35540738
35546029
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA