Entry Detail



General Information

Database ID:exR0209170
RNA Name:AJUBA
RNA Type:mRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):22971177End Site(bp):22982551
External Links:ENSG00000129474



Disease Information

Disease Name:Subarachnoid Hemorrhage
Disease Category:Nervous System Diseases
MeSH ID:D013345
Type:Diseases Category/Nervous System Diseases
Alias:SAH (Subarachnoid Hemorrhage)//SAHs (Subarachnoid Hemorrhage)//Hemorrhage, Subarachnoid//Hemorrhages, Subarachnoid//Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Aneurysmal//Aneurysmal Subarachnoid Hemorrhage//Aneurysmal Subarachnoid Hemorrhages//Hemorrhage, Aneurysmal Subarachnoid//Hemorrhages, Aneurysmal Subarachnoid//Subarachnoid Hemorrhages, Aneurysmal//Subarachnoid Hemorrhage, Spontaneous//Hemorrhage, Spontaneous Subarachnoid//Hemorrhages, Spontaneous Subarachnoid//Spontaneous Subarachnoid Hemorrhage//Spontaneous Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Spontaneous//Perinatal Subarachnoid Hemorrhage//Hemorrhage, Perinatal Subarachnoid//Hemorrhages, Perinatal Subarachnoid//Perinatal Subarachnoid Hemorrhages//Subarachnoid Hemorrhage, Perinatal//Subarachnoid Hemorrhages, Perinatal//Subarachnoid Hemorrhage, Intracranial//Hemorrhage, Intracranial Subarachnoid//Hemorrhages, Intracranial Subarachnoid//Intracranial Subarachnoid Hemorrhage//Intracranial Subarachnoid Hemorrhages//Subarachnoid Hemorrhages, Intracranial



Expression Detail

GEO ID:GSE121868
Description:Profiles of Extracellular RNA in Cerebrospinal Fluid and Plasma from Subarachnoid Hemorrhage Patients
Experimental Design:Disease Sample Source
Case Disease Type:Subarachnoid Hemorrhage
Case Disease SubType:NA
Case Sample:Subarachnoid Hemorrhage
Control Sample:Blood Plasma
Number of Case:257
Number of Control:266
Number of Samples:523





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RXRA
chr9
134317098
134440585
+
RACK1
chr5
181236897
181248096
-
ARL6IP4
chr12
122980060
122982913
+
SORL1
chr11
121452314
121633763
+
PISD
chr22
31618491
31662432
-
LDHA
chr11
18394560
18408425
+
TUBA1A
chr12
49184795
49189080
-
B2M
chr15
44711487
44718877
+
SUGP2
chr19
18990888
19034023
-
HNRNPC
chr14
21209136
21269494
-
AC003006.1
chr19
57682045
57753575
+
IFITM3
chr11
319676
327537
-
VDAC1
chr5
133971871
134004975
-
TPT1
chr13
45333471
45341370
-
CACNG8
chr19
53963040
53990215
+
HMGA1
chr6
34236873
34246231
+
RAVER1
chr19
10316212
10333638
-
PSMD10
chrX
108084207
108091549
-
CNBP
chr3
129169484
129183922
-
CAPZA2
chr7
116811070
116922049
+
SHMT1
chr17
18327860
18363563
-
VPS4A
chr16
69311350
69326939
+
CMTM6
chr3
32481312
32502852
-
GAPDH
chr12
6534512
6538374
+
ZNF551
chr19
57681969
57717301
+
TRNP1
chr1
26993692
27000886
+
CPNE1
chr20
35626031
35664956
-
RPL13A
chr19
49487554
49492308
+
HIGD2A
chr5
176388751
176389761
+
DDB1
chr11
61299451
61342596
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC026362.1
chr12
122975320
122982907
+
AC079949.1
chr12
127142029
127146532
-
AP003392.4
chr11
119065263
119065677
-
Display:



Experiment Detail

GEO ID:GSE121868
Sample Source:Blood
Source Fraction:Plasma
Platform:GPL11154
Method:NGS
Num of detected RNA Type:5
Num of detected RNAs of this Type:17671
Sample treatment protocol:NA
RNA Extract protocol:total RNA RNA was isolated using MiRVana Paris (Ambion).
RNA library preparation protocol:TruSeq Small RNA library prep kit (Illumina) was used. Samples were not multiplexed. Strand specificity is non-stranded. Type of starting material is total RNA.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA