Entry Detail



General Information

Database ID:exR0259344
RNA Name:hsa-miR-188-5p
RNA Type:miRNA
Chromosome:chrX
Starnd:+
Coordinate:
Start Site(bp):50003517End Site(bp):50003537
External Links:hsa-miR-188-5p



Disease Information

Disease Name:Chronic Pancreatitis
Disease Category:Digestive System Diseases
MeSH ID:D050500
Type:Diseases Category/Digestive System Diseases
Alias:Pancreatitis, Chronic//Chronic Pancreatitis



Expression Detail

GEO ID:GSE128508
Description:Comprehensive analysis of exosomal miRNA in type 1 autoimmune pancreatitis
Experimental Design:Disease vs Control
Case Disease Type:Chronic Pancreatitis
Case Disease SubType:NA
Case Sample:Chronic Pancreatitis
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABL2
chr1
179099330
179229684
-
AGTRAP
chr1
11736084
11754802
+
CTDSP2
chr12
57819927
57846729
-
FAM49B
chr8
129839593
130017129
-
HMOX1
chr22
35380361
35394207
+
SNX33
chr15
75647906
75662301
+
USP31
chr16
23061406
23149270
-
USP47
chr11
11841423
11961887
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001387
chr4
1902352
1936989
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC021078.1
chr5
149494314
149504670
-
MALAT1
chr11
65497688
65506516
+
NEAT1
chr11
65422774
65445540
+
SNHG15
chr7
44983023
44986961
-
STAG3L5P-PVRIG2P-PILRB
chr7
100336104
100367831
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE128508
Sample Source:Blood
Source Fraction:Exosome
Platform:GPL21263
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1958
Sample treatment protocol:Exosomes were isolated using the ExoQuick exosome precipitation kit.
RNA Extract protocol:total RNA was extracted from cells using miRNesy mini kit (Qiagen).
RNA library preparation protocol:Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray, Kamakura, Japan).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA