exRNAdisease

Entry Detail

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General Information

Database ID: exR0259359 RNA Name: hsa-miR-193b-3p RNA Type: miRNA Chromosome: chr16 Starnd: + Coordinate: Start Site(bp): 14304017 End Site(bp): 14304038 External Links: hsa-miR-193b-3p

Disease Information

Disease Name: Chronic Pancreatitis Disease Category: Digestive System Diseases MeSH ID: D050500 Type: Diseases Category/Digestive System Diseases Alias: Pancreatitis, Chronic//Chronic Pancreatitis

Expression Detail

GEO ID: GSE128508 Description: Comprehensive analysis of exosomal miRNA in type 1 autoimmune pancreatitis Experimental Design: Disease vs Control Case Disease Type: Chronic Pancreatitis Case Disease SubType: NA Case Sample: Chronic Pancreatitis Control Sample: Healthy Number of Case: 10 Number of Control: 10 Number of Samples: 20

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AFAP1 chr4 7758714 7939926 - ANTXR1 chr2 69013178 69249327 + EHD1 chr11 64851642 64888296 - LASP1 chr17 38869859 38921770 + LUZP1 chr1 23084023 23177808 - NUDT21 chr16 56429133 56452199 - RUSC1 chr1 155320894 155331114 + TSPAN14 chr10 80454166 80533124 + ZBTB5 chr9 37438102 37465450 - miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0001025 chr2 69565029 69565697 - lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC092295.2 chr19 36489649 36491040 + AC135050.6 chr16 31122235 31124064 + AL132780.1 chr14 22929607 22956374 + CYTOR chr2 87454781 87636740 + KCNQ1OT1 chr11 2608328 2699994 - LIMD1-AS1 chr3 45676369 45689200 - LINC01184 chr5 127939152 128083172 - MIR194-2HG chr11 64889560 64893449 - MIR4435-2HG chr2 111006015 111523376 - NEAT1 chr11 65422774 65445540 + XIST chrX 73820649 73852723 - ZFAS1 chr20 49278178 49299600 + Display:

Experiment Detail

GEO ID: GSE128508 Sample Source: Blood Source Fraction: Exosome Platform: GPL21263 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 1958 Sample treatment protocol: Exosomes were isolated using the ExoQuick exosome precipitation kit. RNA Extract protocol: total RNA was extracted from cells using miRNesy mini kit (Qiagen). RNA library preparation protocol: Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray, Kamakura, Japan).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA