Entry Detail



General Information

Database ID:exR0326797
RNA Name:hsa-miR-146a-5p
RNA Type:miRNA
Chromosome:chr5
Starnd:+
Coordinate:
Start Site(bp):160485372End Site(bp):160485393
External Links:hsa-miR-146a-5p



Disease Information

Disease Name:Cholelithiasis
Disease Category:Digestive System Diseases
MeSH ID:D002769
Type:Diseases Category/Digestive System Diseases
Alias:Cholelithiases



Expression Detail

GEO ID:GSE85589
Description:Expression data from pancreatic cancers patients and healthy controls
Experimental Design:Cancer vs Control
Case Disease Type:Cholelithiasis
Case Disease SubType:NA
Case Sample:Cholelithiasis
Control Sample:Healthy
Number of Case:10
Number of Control:19
Number of Samples:29





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ALDOA
chr16
30064164
30070457
+
ATP6V0D1
chr16
67438014
67481181
-
FXYD3
chr19
35115879
35124324
+
GATAD1
chr7
92447482
92460075
+
HYOU1
chr11
119044188
119057227
-
JPT2
chr16
1678256
1702280
+
NFIX
chr19
12995608
13098796
+
RNF169
chr11
74748849
74842413
+
SKA2
chr17
59109857
59155260
-
SS18
chr18
26016253
26091217
-
TACC1
chr8
38728186
38853028
+
WDR45B
chr17
82614562
82648553
-
ZNF512B
chr20
63956704
63969930
-
ZNRF3
chr22
28883572
29057488
+
APEH
chr3
49674014
49683971
+
DCAF1
chr3
51395867
51500002
-
GNAS
chr20
58839718
58911192
+
HSP90AA1
chr14
102080738
102139699
-
KDM1A
chr1
23019443
23083689
+
MARCKS
chr6
113857345
113863475
+
NDUFS2
chr1
161197104
161214395
+
RBBP7
chrX
16839283
16870414
-
RPL9
chr4
39452521
39458949
-
SAP18
chr13
21140514
21149084
+
SLC25A5
chrX
119468422
119471396
+
SPAG5
chr17
28577565
28599025
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000418
chr12
69983264
69985939
+
hsa_circ_0001361
chr3
171830241
171851336
+
hsa_circ_0000943
chr19
47421744
47440665
+
hsa_circ_0000799
chr17
65941524
65972074
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
KCNQ1OT1
chr11
2608328
2699994
-
MALAT1
chr11
65497688
65506516
+
NEAT1
chr11
65422774
65445540
+
SNHG16
chr17
76557764
76565348
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE85589
Sample Source:Blood
Source Fraction:Serum
Platform:GPL19117
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2546
Sample treatment protocol:Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm.
RNA Extract protocol:Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea).
RNA library preparation protocol:Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA