Entry Detail



General Information

Database ID:exR0326967
RNA Name:hsa-miR-218-5p
RNA Type:miRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):168768211End Site(bp):168768231
External Links:hsa-miR-218-5p



Disease Information

Disease Name:Cholelithiasis
Disease Category:Digestive System Diseases
MeSH ID:D002769
Type:Diseases Category/Digestive System Diseases
Alias:Cholelithiases



Expression Detail

GEO ID:GSE85589
Description:Expression data from pancreatic cancers patients and healthy controls
Experimental Design:Cancer vs Control
Case Disease Type:Cholelithiasis
Case Disease SubType:NA
Case Sample:Cholelithiasis
Control Sample:Healthy
Number of Case:10
Number of Control:19
Number of Samples:29





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABI2
chr2
203328239
203447728
+
ADCY9
chr16
3953387
4116442
-
CPA4
chr7
130293134
130324180
+
GRK2
chr11
67266473
67286556
+
IGF2
chr11
2129112
2141238
-
LCLAT1
chr2
30447226
30644225
+
LIN28B
chr6
104936616
105083332
+
OXSR1
chr3
38165089
38255484
+
PARD6B
chr20
50731580
50756795
+
PRRC1
chr5
127517609
127555089
+
RBBP9
chr20
18486540
18497225
-
THUMPD1
chr16
20702816
20742084
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000798
chr17
65941524
65944422
+
hsa_circ_0000155
chr1
168007608
168014465
+
hsa_circ_0001452
chr4
153562079
153574079
-
hsa_circ_0001860
chr9
37126308
37126939
+
hsa_circ_0001146
chr20
34241449
34246936
-
hsa_circ_0000799
chr17
65941524
65972074
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004069.1
chr4
105137280
105140619
-
AC021092.1
chr19
44103007
44113183
-
AC125257.1
chr17
41848518
41851447
-
ADAMTSL4-AS1
chr1
150560202
150574552
-
KCNQ1OT1
chr11
2608328
2699994
-
NEAT1
chr11
65422774
65445540
+
OIP5-AS1
chr15
41283990
41309737
+
PSMA3-AS1
chr14
58265365
58298134
-
Display:



Experiment Detail

GEO ID:GSE85589
Sample Source:Blood
Source Fraction:Serum
Platform:GPL19117
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2546
Sample treatment protocol:Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm.
RNA Extract protocol:Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea).
RNA library preparation protocol:Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA