Entry Detail



General Information

Database ID:exR0327038
RNA Name:hsa-miR-302a-5p
RNA Type:miRNA
Chromosome:chr4
Starnd:-
Coordinate:
Start Site(bp):112648224End Site(bp):112648246
External Links:hsa-miR-302a-5p



Disease Information

Disease Name:Cholelithiasis
Disease Category:Digestive System Diseases
MeSH ID:D002769
Type:Diseases Category/Digestive System Diseases
Alias:Cholelithiases



Expression Detail

GEO ID:GSE85589
Description:Expression data from pancreatic cancers patients and healthy controls
Experimental Design:Cancer vs Control
Case Disease Type:Cholelithiasis
Case Disease SubType:NA
Case Sample:Cholelithiasis
Control Sample:Healthy
Number of Case:10
Number of Control:19
Number of Samples:29





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ATP5PF
chr21
25716503
25735673
-
HSPA8
chr11
123057489
123063230
-
METTL8
chr2
171317405
171434802
-
MLH1
chr3
36993350
37050846
+
NCAPD3
chr11
134150119
134225454
-
PELO
chr5
52787916
52804044
+
PTTG1
chr5
160421855
160428739
+
RAN
chr12
130872037
130877678
+
RPS4Y1
chrY
2841602
2932000
+
SP4
chr7
21428043
21514822
+
SUB1
chr5
32531633
32604079
+
TDGF1
chr3
46574534
46582457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE85589
Sample Source:Blood
Source Fraction:Serum
Platform:GPL19117
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2546
Sample treatment protocol:Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm.
RNA Extract protocol:Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea).
RNA library preparation protocol:Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA