exRNAdisease

Entry Detail

---



General Information

Database ID: exR0327452 RNA Name: hsa-miR-423-3p RNA Type: miRNA Chromosome: chr17 Starnd: + Coordinate: Start Site(bp): 30117131 End Site(bp): 30117153 External Links: hsa-miR-423-3p

Disease Information

Disease Name: Cholelithiasis Disease Category: Digestive System Diseases MeSH ID: D002769 Type: Diseases Category/Digestive System Diseases Alias: Cholelithiases

Expression Detail

GEO ID: GSE85589 Description: Expression data from pancreatic cancers patients and healthy controls Experimental Design: Cancer vs Control Case Disease Type: Cholelithiasis Case Disease SubType: NA Case Sample: Cholelithiasis Control Sample: Healthy Number of Case: 10 Number of Control: 19 Number of Samples: 29

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ATXN7 chr3 63864557 64003462 + DCBLD2 chr3 98795941 98901695 - ERP29 chr12 112013348 112023449 + MGRN1 chr16 4616493 4690974 + SH3GLB2 chr9 129007036 129028303 - SLC7A1 chr13 29509414 29595688 - ENO1 chr1 8861000 8879190 - miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0001866 chr9 86293355 86297981 - hsa_circ_0001865 chr9 86292641 86293514 - lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE85589 Sample Source: Blood Source Fraction: Serum Platform: GPL19117 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 2546 Sample treatment protocol: Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm. RNA Extract protocol: Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea). RNA library preparation protocol: Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA