Entry Detail



General Information

Database ID:exR0327529
RNA Name:hsa-miR-4319
RNA Type:miRNA
Chromosome:chr18
Starnd:-
Coordinate:
Start Site(bp):44970140End Site(bp):44970156
External Links:hsa-miR-4319



Disease Information

Disease Name:Cholelithiasis
Disease Category:Digestive System Diseases
MeSH ID:D002769
Type:Diseases Category/Digestive System Diseases
Alias:Cholelithiases



Expression Detail

GEO ID:GSE85589
Description:Expression data from pancreatic cancers patients and healthy controls
Experimental Design:Cancer vs Control
Case Disease Type:Cholelithiasis
Case Disease SubType:NA
Case Sample:Cholelithiasis
Control Sample:Healthy
Number of Case:10
Number of Control:19
Number of Samples:29





Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000370
chr11
128628009
128651918
+
hsa_circ_0001723
chr7
91924202
91948826
+
hsa_circ_0001492
chr5
65284462
65290692
+
hsa_circ_0000494
chr13
76134888
76143643
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007780.1
chr17
68413623
68524949
+
AC084082.1
chr8
66112667
66126632
+
AC108134.2
chr16
3156736
3157483
-
AC245014.3
chr1
145281116
145281462
+
AL132780.1
chr14
22929607
22956374
+
AL137782.1
chr13
75549773
75807120
+
AL162258.1
chr1
153626332
153634340
-
DANCR
chr4
52712404
52720351
+
KCNQ1OT1
chr11
2608328
2699994
-
NEAT1
chr11
65422774
65445540
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE85589
Sample Source:Blood
Source Fraction:Serum
Platform:GPL19117
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2546
Sample treatment protocol:Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm.
RNA Extract protocol:Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea).
RNA library preparation protocol:Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA