Entry Detail



General Information

Database ID:exR0327553
RNA Name:hsa-miR-4426
RNA Type:miRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):192716333End Site(bp):192716349
External Links:hsa-miR-4426



Disease Information

Disease Name:Cholelithiasis
Disease Category:Digestive System Diseases
MeSH ID:D002769
Type:Diseases Category/Digestive System Diseases
Alias:Cholelithiases



Expression Detail

GEO ID:GSE85589
Description:Expression data from pancreatic cancers patients and healthy controls
Experimental Design:Cancer vs Control
Case Disease Type:Cholelithiasis
Case Disease SubType:NA
Case Sample:Cholelithiasis
Control Sample:Healthy
Number of Case:10
Number of Control:19
Number of Samples:29





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
UFC1
chr1
161152776
161158856
+
NDUFA4
chr7
10931943
10940153
-
N4BP3
chr5
178113532
178126081
+
MTRNR2L11
chr1
237943724
237945275
-
RNF181
chr2
85595725
85597708
+
VMP1
chr17
59707192
59842255
+
DDB1
chr11
61299451
61342596
-
SAP18
chr13
21140514
21149084
+
DOCK6
chr19
11199295
11262524
-
NSMAF
chr8
58583508
58659853
-
APP
chr21
25880550
26171128
-
TMEM170A
chr16
75443054
75465497
-
TKFC
chr11
61333210
61353295
+
CTSZ
chr20
58995185
59007254
-
AL136454.1
chr1
192716132
192716653
+
TPT1
chr13
45333471
45341370
-
PTPN6
chr12
6946468
6961316
+
CAPNS1
chr19
36139953
36150353
+
CCNL2
chr1
1385711
1399335
-
RABGAP1L
chr1
174159410
174995308
+
RACK1
chr5
181236897
181248096
-
HMGN2
chr1
26472440
26476642
+
SEZ6L2
chr16
29871159
29899547
-
GAPDH
chr12
6534512
6538374
+
CD52
chr1
26317958
26320523
+
PCBP2
chr12
53452102
53481162
+
NDUFA11
chr19
5891276
5904006
-
REXO1
chr19
1815248
1848483
-
ZNF655
chr7
99558406
99576453
+
DCAF12
chr9
34086387
34127399
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC105942.1
chr1
94927361
94963616
+
Display:



Experiment Detail

GEO ID:GSE85589
Sample Source:Blood
Source Fraction:Serum
Platform:GPL19117
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2546
Sample treatment protocol:Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm.
RNA Extract protocol:Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea).
RNA library preparation protocol:Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA