Entry Detail



General Information

Database ID:exR0327678
RNA Name:hsa-miR-4524b-5p
RNA Type:miRNA
Chromosome:chr17
Starnd:+
Coordinate:
Start Site(bp):69099570End Site(bp):69099590
External Links:hsa-miR-4524b-5p



Disease Information

Disease Name:Cholelithiasis
Disease Category:Digestive System Diseases
MeSH ID:D002769
Type:Diseases Category/Digestive System Diseases
Alias:Cholelithiases



Expression Detail

GEO ID:GSE85589
Description:Expression data from pancreatic cancers patients and healthy controls
Experimental Design:Cancer vs Control
Case Disease Type:Cholelithiasis
Case Disease SubType:NA
Case Sample:Cholelithiasis
Control Sample:Healthy
Number of Case:10
Number of Control:19
Number of Samples:29





Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000540
chr14
55799534
55821940
+
hsa_circ_0001731
chr7
100731990
100738448
+
hsa_circ_0001723
chr7
91924202
91948826
+
hsa_circ_0001159
chr20
40161688
40179999
-
hsa_circ_0001699
chr7
40027197
40041630
+
hsa_circ_0000826
chr18
9182379
9221997
+
hsa_circ_0001263
chr3
5215701
5216099
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004069.1
chr4
105137280
105140619
-
AC009022.1
chr16
69976297
70065948
-
AC021078.1
chr5
149494314
149504670
-
AC079781.5
chr7
97851688
97972985
-
AC114980.1
chr5
93860669
93863825
-
AL049840.4
chr14
103694516
103695050
-
AP000317.2
chr21
34073592
34360033
+
KCNQ1OT1
chr11
2608328
2699994
-
LINC00662
chr19
27681072
27794005
-
LINC01184
chr5
127939152
128083172
-
MALAT1
chr11
65497688
65506516
+
MCM3AP-AS1
chr21
46229196
46259390
+
NUTM2A-AS1
chr10
87201647
87342612
-
NUTM2B-AS1
chr10
79661394
79826594
-
OIP5-AS1
chr15
41283990
41309737
+
RRN3P2
chr16
29074976
29116718
+
SNHG1
chr11
62851984
62855953
-
SNHG16
chr17
76557764
76565348
+
ZSCAN16-AS1
chr6
28015122
28137293
-
Display:



Experiment Detail

GEO ID:GSE85589
Sample Source:Blood
Source Fraction:Serum
Platform:GPL19117
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2546
Sample treatment protocol:Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm.
RNA Extract protocol:Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea).
RNA library preparation protocol:Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA