Entry Detail



General Information

Database ID:exR0327822
RNA Name:hsa-miR-4709-3p
RNA Type:miRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):74480135End Site(bp):74480157
External Links:hsa-miR-4709-3p



Disease Information

Disease Name:Cholelithiasis
Disease Category:Digestive System Diseases
MeSH ID:D002769
Type:Diseases Category/Digestive System Diseases
Alias:Cholelithiases



Expression Detail

GEO ID:GSE85589
Description:Expression data from pancreatic cancers patients and healthy controls
Experimental Design:Cancer vs Control
Case Disease Type:Cholelithiasis
Case Disease SubType:NA
Case Sample:Cholelithiasis
Control Sample:Healthy
Number of Case:10
Number of Control:19
Number of Samples:29





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
BCORL1
chrX
129981107
130058083
+
COQ8A
chr1
226897536
226987545
+
DNAJB6
chr7
157335381
157417439
+
LAMC1
chr1
183023420
183145592
+
PURA
chr5
140107777
140125619
+
TMEM167A
chr5
83052846
83077863
-
BIK
chr22
43110750
43129712
+
CLSTN3
chr12
7129698
7158945
+
DHX16
chr6
30653119
30673006
-
EMC4
chr15
34225013
34230156
+
ETV3
chr1
157121191
157138474
-
GATM
chr15
45361124
45402327
-
MED1
chr17
39404285
39451272
-
MED28
chr4
17614641
17634105
+
MSH3
chr5
80654652
80876815
+
MTRNR2L12
chr3
96617188
96618236
-
NDUFA4
chr7
10931943
10940153
-
NPC2
chr14
74476192
74494177
-
PLBD1
chr12
14503661
14567883
-
PLEKHA5
chr12
19129752
19376400
+
RACK1
chr5
181236897
181248096
-
RBM15B
chr3
51391285
51397908
+
SLC50A1
chr1
155135344
155138857
+
TPRG1L
chr1
3625015
3630127
+
WNK1
chr12
752579
911452
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE85589
Sample Source:Blood
Source Fraction:Serum
Platform:GPL19117
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2546
Sample treatment protocol:Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm.
RNA Extract protocol:Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea).
RNA library preparation protocol:Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA