exRNAdisease

Entry Detail

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General Information

Database ID: exR0327986 RNA Name: hsa-miR-486-5p RNA Type: miRNA Chromosome: chr8 Starnd: - Coordinate: Start Site(bp): 41660484 End Site(bp): 41660505 External Links: hsa-miR-486-5p

Disease Information

Disease Name: Cholelithiasis Disease Category: Digestive System Diseases MeSH ID: D002769 Type: Diseases Category/Digestive System Diseases Alias: Cholelithiases

Expression Detail

GEO ID: GSE85589 Description: Expression data from pancreatic cancers patients and healthy controls Experimental Design: Cancer vs Control Case Disease Type: Cholelithiasis Case Disease SubType: NA Case Sample: Cholelithiasis Control Sample: Healthy Number of Case: 10 Number of Control: 19 Number of Samples: 29

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand CPSF2 chr14 92121969 92172145 + NCOA6 chr20 34689097 34825651 - miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0001666 chr6 170626457 170639638 + lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004832.5 chr22 30420512 30420912 + AL137129.1 chr14 61734138 61776260 + NEAT1 chr11 65422774 65445540 + XIST chrX 73820649 73852723 - Display:

Experiment Detail

GEO ID: GSE85589 Sample Source: Blood Source Fraction: Serum Platform: GPL19117 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 2546 Sample treatment protocol: Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm. RNA Extract protocol: Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea). RNA library preparation protocol: Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA