Entry Detail



General Information

Database ID:exR0328135
RNA Name:hsa-miR-519e-5p
RNA Type:miRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):53679953End Site(bp):53679974
External Links:hsa-miR-519e-5p



Disease Information

Disease Name:Cholelithiasis
Disease Category:Digestive System Diseases
MeSH ID:D002769
Type:Diseases Category/Digestive System Diseases
Alias:Cholelithiases



Expression Detail

GEO ID:GSE85589
Description:Expression data from pancreatic cancers patients and healthy controls
Experimental Design:Cancer vs Control
Case Disease Type:Cholelithiasis
Case Disease SubType:NA
Case Sample:Cholelithiasis
Control Sample:Healthy
Number of Case:10
Number of Control:19
Number of Samples:29





Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001349
chr3
152132729
152150709
+
hsa_circ_0001409
chr4
48835417
48859382
+
hsa_circ_0000987
chr2
30748452
30756180
+
hsa_circ_0000670
chr16
9199043
9199243
+
hsa_circ_0001495
chr5
68470703
68471364
+
hsa_circ_0001329
chr3
119219541
119222868
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC021078.1
chr5
149494314
149504670
-
ENTPD3-AS1
chr3
40313802
40453329
-
GAS5
chr1
173858559
173868882
-
KCNQ1OT1
chr11
2608328
2699994
-
LINC01578
chr15
92819540
92899701
+
MALAT1
chr11
65497688
65506516
+
SNHG3
chr1
28505980
28510892
+
TUG1
chr22
30969245
30979395
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE85589
Sample Source:Blood
Source Fraction:Serum
Platform:GPL19117
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:2546
Sample treatment protocol:Serum samples were collected in 10-mL BD serum tubes and centrifuged at 4°C for 20 minutes at 3000 rpm.
RNA Extract protocol:Total RNA containing miRNA was extracted from the serum samples using the Serum miRNA purification kit (Genolution, Seoul, Korea).
RNA library preparation protocol:Biotin RNA samples (130 ng) were labelled using the FlashTag™ Biotin RNA Labeling Kit (Genisphere, Hatfield, PA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA