Entry Detail



General Information

Database ID:exR0355203
RNA Name:DNM3OS
RNA Type:lncRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):172138397End Site(bp):172144840
External Links:ENSG00000230630



Disease Information

Disease Name:Rheumatoid Arthritis
Disease Category:Musculoskeletal Diseases
MeSH ID:D001172
Type:Diseases Category/Musculoskeletal Diseases
Alias:Arthritis, Rheumatoid//Rheumatoid Arthritis



Expression Detail

GEO ID:GSE94519
Description:Long noncoding RNAs expression profile in patients with rheumatoid arthritis
Experimental Design:Disease vs Control
Case Disease Type:Rheumatoid Arthritis
Case Disease SubType:NA
Case Sample:Rheumatoid Arthritis
Control Sample:Healthy
Number of Case:3
Number of Control:3
Number of Samples:6





Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-134-5p
chr14
101054694
101054715
+
hsa-miR-370-3p
chr14
100911186
100911207
+
hsa-miR-552-3p
chr1
34669614
34669634
-
hsa-miR-214-5p
chr1
172138857
172138878
-
hsa-miR-3118
chr15
21843793
21843815
+
hsa-miR-642b-3p
chr19
45674941
45674962
-
hsa-miR-642a-3p
chr19
45674978
45674999
+
hsa-miR-506-5p
chrX
147230788
147230809
-
hsa-miR-6512-3p
chr2
177313811
177313832
-
hsa-miR-6720-5p
chr6
1390359
1390381
-
hsa-miR-6893-3p
chr8
144435551
144435572
-
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE94519
Sample Source:Blood
Source Fraction:Serum
Platform:GPL20115
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1224
Sample treatment protocol:All blood samples were separately collected and sequentially centrifuged at 2000 rpm for 10 min. The cell-free serum from the supernatant was stored at -80°C for further detection.
RNA Extract protocol:RNA was prepared using the Versagene Blood RNA Purification kit (Gentra Systems, Minneapolis MN).
RNA library preparation protocol:Cyanine-3 (Cy3) labeled cRNA was prepared from 0.5 ug RNA using the One-Color Low RNA Input Linear Amplification PLUS kit (Agilent) according to the manufacturer's instructions, followed by RNAeasy column purification (QIAGEN, Valencia, CA).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA