exRNAdisease

Entry Detail

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General Information

Database ID: exR0373392 RNA Name: AAMDC RNA Type: mRNA Chromosome: chr11 Starnd: + Coordinate: Start Site(bp): 77821109 End Site(bp): 77918432 External Links: ENSG00000087884

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ATF6B chr6 32115264 32128253 - BAZ2A chr12 56595596 56636816 - CALM3 chr19 46601074 46610782 + EIF3L chr22 37848868 37889407 + HAPLN3 chr15 88877288 88895626 - ILKAP chr2 238170402 238203708 - IMP4 chr2 130342877 130347967 + LHPP chr10 124461823 124617888 + MTFR1L chr1 25818640 25832942 + RPL18 chr19 48615328 48619184 - SH3GL1 chr19 4360370 4400547 - TPM4 chr19 16067021 16103002 + TTC17 chr11 43358920 43494933 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA