exRNAdisease

Entry Detail

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General Information

Database ID: exR0373449 RNA Name: ABHD10 RNA Type: mRNA Chromosome: chr3 Starnd: + Coordinate: Start Site(bp): 111979010 End Site(bp): 111993368 External Links: ENSG00000144827

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand RPN2 chr20 37178410 37241619 + STAC2 chr17 39210541 39225945 - GLUL chr1 182381704 182392206 - COL4A2 chr13 110305812 110513209 + YBX3 chr12 10699089 10723323 - CXCR4 chr2 136114349 136118149 - LBHD1 chr11 62662817 62672255 - PPIA chr7 44796680 44824564 + C11orf98 chr11 62662816 62665217 - RPL13 chr16 89560657 89566828 + MBD4 chr3 129430944 129440179 - MTRNR2L8 chr11 10507894 10509186 - DIDO1 chr20 62877738 62937952 - MYO1G chr7 44962662 44979088 - CTSZ chr20 58995185 59007254 - EEF1D chr8 143579697 143599541 - AP001458.2 chr11 62649694 62665178 - TBP chr6 170554302 170572870 + RPL3 chr22 39312882 39320389 - INTS12 chr4 105682627 105895986 - RPS23 chr5 82273320 82278396 - ATXN7 chr3 63864557 64003462 + MPP6 chr7 24573268 24694193 + RPS5 chr19 58386400 58394806 + RPL27A chr11 8682788 8714759 + TBC1D10B chr16 30357102 30370494 - TALDO1 chr11 747415 765012 + CLCN3 chr4 169612633 169723673 + ZNF277 chr7 112206695 112343934 + UBXN7 chr3 196347662 196432430 - miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA