exRNAdisease

Entry Detail

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General Information

Database ID: exR0373505 RNA Name: ACBD4 RNA Type: mRNA Chromosome: chr17 Starnd: + Coordinate: Start Site(bp): 45132600 End Site(bp): 45144181 External Links: ENSG00000181513

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ANP32A chr15 68778535 68820897 - BSG chr19 571277 583493 + CCDC6 chr10 59788747 59906556 - CDON chr11 125955796 126063335 - DYNLL2 chr17 58083419 58095542 + EIF3C chr16 28688558 28735730 + ENO1 chr1 8861000 8879190 - GAPDH chr12 6534512 6538374 + GATAD1 chr7 92447482 92460075 + HPN chr19 35040506 35066571 + KAT7 chr17 49788681 49835026 + LIN28A chr1 26410817 26429728 + LRP4 chr11 46856717 46918642 - MAD2L2 chr1 11674480 11691650 - PDE4D chr5 58969038 60522120 - PDHB chr3 58427630 58433857 - PPP6R1 chr19 55229779 55259017 - SCAND1 chr20 35953617 35959472 - TMA16 chr4 163494442 163520539 + TPM3 chr1 154155304 154194648 - TPRN chr9 137191617 137204193 - TSR1 chr17 2322396 2336657 - TUBA1B chr12 49127782 49131397 - USP39 chr2 85602856 85649283 + VPS26C chr21 37223420 37267919 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC027290.2 chr12 122865335 122867021 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA