exRNAdisease

Entry Detail

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General Information

Database ID: exR0373528 RNA Name: ACOT2 RNA Type: mRNA Chromosome: chr14 Starnd: + Coordinate: Start Site(bp): 73567620 End Site(bp): 73575658 External Links: ENSG00000119673

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ACOT1 chr14 73537143 73543796 + ACOT4 chr14 73591706 73596496 + ACOT6 chr14 73610945 73619888 + ACSL4 chrX 109624244 109733403 - AL136295.5 chr14 24147548 24166452 + ANKRD16 chr10 5861616 5889906 - CRABP2 chr1 156699606 156705816 - ESYT2 chr7 158730995 158830253 - GOT2 chr16 58707131 58734342 - LIN28A chr1 26410817 26429728 + MRPL4 chr19 10251901 10260055 + MRPS10 chr6 42206807 42217861 - MUC4 chr3 195746765 195811973 - NBN chr8 89933336 90003228 - PARK7 chr1 7954291 7985505 + RNF130 chr5 179911651 180072113 - RNF31 chr14 24146683 24160660 + RPL18 chr19 48615328 48619184 - RPS9 chr19 54200809 54249003 + SDC3 chr1 30869466 30908758 - SDHAF4 chr6 70566917 70589569 + SEMA5B chr3 122909082 123028605 - SIGIRR chr11 405716 417455 - SIVA1 chr14 104753147 104768494 + TARDBP chr1 11012344 11026420 + TMEM259 chr19 1009648 1021179 - TSC22D4 chr7 100463359 100479232 - TTI1 chr20 37983007 38033461 - UBC chr12 124911604 124917368 - miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA