exRNAdisease

Entry Detail

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General Information

Database ID: exR0373594 RNA Name: ACVR2A RNA Type: mRNA Chromosome: chr2 Starnd: + Coordinate: Start Site(bp): 147844517 End Site(bp): 147930826 External Links: ENSG00000121989

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AL133352.1 chr10 100505628 100529881 - AREL1 chr14 74653437 74713108 - CHST8 chr19 33621953 33773509 + DDX17 chr22 38483438 38507660 - GOLGA4 chr3 37243177 37366751 + GRK3 chr22 25564675 25729294 + MAGT1 chrX 77826364 77895593 - NDUFB8 chr10 100523740 100530000 - PRKDC chr8 47773111 47960178 - RPL3 chr22 39312882 39320389 - STEAP3 chr2 119223831 119265652 + TM9SF3 chr10 96518110 96587452 - TRIM13 chr13 49995888 50020481 + TSPYL2 chrX 53082367 53088540 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC022211.2 chr17 75145261 75146546 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA