exRNAdisease

Entry Detail

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General Information

Database ID: exR0373606 RNA Name: ADAM11 RNA Type: mRNA Chromosome: chr17 Starnd: + Coordinate: Start Site(bp): 44758988 End Site(bp): 44781846 External Links: ENSG00000073670

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AGRN chr1 1020120 1056118 + CREBZF chr11 85659708 85682908 - CSDE1 chr1 114716913 114758676 - FANCA chr16 89737549 89816657 - GHDC chr17 42188799 42194532 - GOLPH3 chr5 32124716 32174319 - HCFC1 chrX 153947557 153971818 - HDGFL3 chr15 83112738 83207823 - KIAA1841 chr2 61065871 61138034 + LMNB2 chr19 2427638 2456959 - LRP6 chr12 12116025 12267044 - MCC chr5 113022099 113488823 - MDC1 chr6 30699807 30717447 - MDGA1 chr6 37630679 37699306 - MT-ND1 chrMT 3307 4262 + NISCH chr3 52455118 52493068 + NOP53 chr19 47745546 47757058 + PLXNA1 chr3 126988594 127037392 + SF3B3 chr16 70523791 70577670 + SNX17 chr2 27370496 27377535 + TLE3 chr15 70047790 70098176 - TM9SF2 chr13 99446311 99564048 + TMEM25 chr11 118531041 118547280 + TNPO2 chr19 12699194 12724011 - TUBB chr6 30720352 30725426 + UNC119B chr12 120710458 120723640 + YBX1 chr1 42682418 42703805 + ZNF70 chr22 23738682 23751112 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand LINC02228 chr5 25087450 25190956 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA