exRNAdisease

Entry Detail

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General Information

Database ID: exR0373616 RNA Name: ADAM23 RNA Type: mRNA Chromosome: chr2 Starnd: + Coordinate: Start Site(bp): 206443532 End Site(bp): 206621127 External Links: ENSG00000114948

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ASCC2 chr22 29788609 29838304 - C10orf82 chr10 116663696 116670264 - C20orf27 chr20 3753508 3768387 - CABP1 chr12 120640552 120667324 + CBL chr11 119206298 119313926 + DDOST chr1 20651767 20661544 - DHRS7B chr17 21123364 21193265 + EIF5A chr17 7306999 7312463 + GMDS chr6 1623806 2245605 - GRINA chr8 143990056 143993415 + HERC2 chr15 28111040 28322172 - HMGB2 chr4 173331376 173334432 - HSP90AB1 chr6 44246166 44253888 + HSP90B1 chr12 103930107 103953645 + IVNS1ABP chr1 185296388 185317273 - MDC1 chr6 30699807 30717447 - NPM1 chr5 171387116 171411137 + PIP4P1 chr14 20457719 20461612 - RPL13 chr16 89560657 89566828 + RPL23 chr17 38847860 38853764 - RRAGA chr9 19049427 19051025 + SLC39A6 chr18 36108531 36129385 - TEKT3 chr17 15303811 15341632 - TMUB2 chr17 44186970 44191929 + USP1 chr1 62436297 62451804 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA