exRNAdisease

Entry Detail

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General Information

Database ID: exR0373623 RNA Name: ADAM8 RNA Type: mRNA Chromosome: chr10 Starnd: - Coordinate: Start Site(bp): 133262420 End Site(bp): 133276868 External Links: ENSG00000151651

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABLIM1 chr10 114431113 114768061 - AC007192.1 chr19 18153158 18178117 + ACLY chr17 41866917 41930542 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - AP1B1 chr22 29327680 29423179 - ASCC2 chr22 29788609 29838304 - AVL9 chr7 32495426 32588726 + BIRC5 chr17 78214186 78225636 + CAND1 chr12 67269358 67319953 + DCAF7 chr17 63550477 63594279 + EBI3 chr19 4229523 4237528 + EEF1B2 chr2 206159585 206162928 + HNRNPK chr9 83968083 83980616 - IFI30 chr19 18173162 18178117 + IGF2 chr11 2129112 2141238 - KIF1C chr17 4997950 5028401 + LRFN4 chr11 66856647 66860475 + MSL3 chrX 11758159 11775772 + OR4K15 chr14 19975444 19976659 + PANK4 chr1 2508537 2526611 - PTGES2 chr9 128120693 128128462 - RABEP2 chr16 28904421 28936526 - RPL35A chr3 197950190 197956610 + RPS9 chr19 54200809 54249003 + SLC7A5 chr16 87830023 87869507 - TFDP1 chr13 113584721 113641473 + TNPO2 chr19 12699194 12724011 - TUBGCP2 chr10 133278630 133312337 - ZFAT chr8 134477788 134713049 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AL359924.1 chr1 237862175 237928321 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA