exRNAdisease

Entry Detail

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General Information

Database ID: exR0373627 RNA Name: ADAMTS10 RNA Type: mRNA Chromosome: chr19 Starnd: - Coordinate: Start Site(bp): 8580240 End Site(bp): 8610735 External Links: ENSG00000142303

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010422.3 chr19 12643831 12648397 - ALDOA chr16 30064164 30070457 + ATXN2L chr16 28823035 28837237 + BIN1 chr2 127048027 127107288 - CD59 chr11 33703010 33736491 - HDDC3 chr15 90929964 90935196 - HNRNPDL chr4 82422564 82430408 - HSP90AB1 chr6 44246166 44253888 + LAPTM4B chr8 97775057 97853013 + LARGE1 chr22 33162226 33922841 - MTOR chr1 11106535 11262551 - PTMA chr2 231706895 231713541 + RPL18A chr19 17859910 17864153 + TPI1 chr12 6867119 6870948 + TSPAN4 chr11 842812 867116 + TUBB chr6 30720352 30725426 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA